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Robert Penchovsky's Website
EBWS - Bioinformatics
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RevComOligo
If you want to have your reverse complementary DNA sequence click here…
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RandomOligoGenerator
If you want to have random DNA, RNA or peptide sequences click here…
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Motif Searcher
If you want to search for motifs in any DNA, RNA or peptide sequences click here…
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Restriction Mapping
If you want to search for restriction sites in DNA sequences click here…
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Prokaryotic ORF Finder
If you want to search for Open Reading Frames (ORFs) in prokaryotic DNA sequences click here…
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DNA/RNA Mutations
If you want to perform random DNA or RNA mutations at different rates click here…
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DNA/RNA TM Calculator
If you want to calculate the melting temperature (TM) of DNA or RNA click here…
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Guide RNA Generator
If you want to generate guide RNA sequences for CRISPR/Cas9 system click here…
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PCR Annealing Temperature Calculator
If you want to calculate the annealing temperature for PCR reaction click here…
ExBWS-Bioinformatics
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DNA/RNA Translator
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AminoCODE
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Virtual PCR
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HydropathyPlot-Proteins
If you want to perform a Hydropathy plot of an amino acid sequence click here…
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Reverse Translator
If you want to perform a Reverse translation of a protein sequence click here…
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Eukaryotic ORF finder
If you want to search for Open Reading Frames (ORFs) in Eukaryotic DNA sequences click here…
Riboswitch database
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RSwitch database
To browse the RSwitch database of riboswitches as antibacterial drug targets click here…
Ribozyme generators
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Oligonucleotide-sensing ribozyme generators
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Oligonucleotide-sensing ribozyme generator
A generator of slow oligonucleotide-sensing ribozyme with YES Boolean logic function click here…
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Inverse ribozyme generator
More Applications
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Bioinformatics Websites
NCBI…; BLAST…; EBI…; PrimerBLAST…; UCSC…; Rfam…; PDB…; KEGG…; BioCYC…;
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IP Address
If you want to find out your current IP address please click here…
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Calculator
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Calendar
Dear Visitor,
This program will predict the hydropathy of an amino acid sequence.
HydropathyPlot-Proteins
Help: Numbers, spaces, star (*) and brackets (){}[]
will be ignored in the input. The program supports and the 21st amino acid Selenocysteine (Sec).
This program will produce a hydropathy plot of the input protein sequence. Will divide the sequence into blocks of 10 a.a. and will
produce the hydropathy plot. The Kyte-Doolittle or the Moon-Fleming scale can be selected. The applet will also generate the hydropathy plot of the 9 frames of the
input sequence.
Notice: Letters not corresponding to amino acids (B, J, O, X and Z) will be ignored.
Created together with Dr. D. Kaloudas. For any comments or inquires you can email him...
This applet is published in the International Journal of Bioinformatics Research and Applications.