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Robert Penchovsky's Website
EBWS - Bioinformatics
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RevComOligo
If you want to have your reverse complementary DNA sequence click here…
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RandomOligoGenerator
If you want to have random DNA, RNA or peptide sequences click here…
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Motif Searcher
If you want to search for motifs in any DNA, RNA or peptide sequences click here…
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Restriction Mapping
If you want to search for restriction sites in DNA sequences click here…
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Prokaryotic ORF Finder
If you want to search for Open Reading Frames (ORFs) in prokaryotic DNA sequences click here…
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DNA/RNA Mutations
If you want to perform random DNA or RNA mutations at different rates click here…
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DNA/RNA TM Calculator
If you want to calculate the melting temperature (TM) of DNA or RNA click here…
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Guide RNA Generator
If you want to generate guide RNA sequences for CRISPR/Cas9 system click here…
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PCR Annealing Temperature Calculator
If you want to calculate the annealing temperature for PCR reaction click here…
ExBWS-Bioinformatics
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DNA/RNA Translator
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AminoCODE
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Virtual PCR
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HydropathyPlot-Proteins
If you want to perform a Hydropathy plot of an amino acid sequence click here…
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Reverse Translator
If you want to perform a Reverse translation of a protein sequence click here…
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Eukaryotic ORF finder
If you want to search for Open Reading Frames (ORFs) in Eukaryotic DNA sequences click here…
Riboswitch database
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RSwitch database
To browse the RSwitch database of riboswitches as antibacterial drug targets click here…
Ribozyme generators
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Oligonucleotide-sensing ribozyme generators
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Oligonucleotide-sensing ribozyme generator
A generator of slow oligonucleotide-sensing ribozyme with YES Boolean logic function click here…
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Inverse ribozyme generator
More Applications
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Bioinformatics Websites
NCBI…; BLAST…; EBI…; PrimerBLAST…; UCSC…; Rfam…; PDB…; KEGG…; BioCYC…;
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IP Address
If you want to find out your current IP address please click here…
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Calculator
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Calendar
Dear Visitor,
This program will predict the hydropathy of an amino acid sequence.
HydropathyPlot-Proteins
Help: Numbers, spaces, star (*) and brackets (){}[]
will be ignored in the input. The program supports and the 21st amino acid Selenocysteine (Sec).
This program will produce a hydropathy plot of the input protein sequence. Will divide the sequence into blocks of 10 a.a. and will
produce the hydropathy plot. The Kyte-Doolittle or the Moon-Fleming scale can be selected. The applet will also generate the hydropathy plot of the 9 frames of the
input sequence.
Notice: Letters not corresponding to amino acids (B, J, O, X and Z) will be ignored.
![Send email to D.Kaloudas](images/DK.png)
Created together with Dr. D. Kaloudas. For any comments or inquires you can email him...
This applet is published in the International Journal of Bioinformatics Research and Applications.