• SCIENCE PAPERS - scroll down to see more publications

  • Monograph in Bulgarian:

    DESIGN OF ANTISENSE OLIGONUCLEOTIDES AND THEIR APPLICATIONS AS ANTIBACTERIAL AGENTS: PRINCIPLES, MECHANISMS OF ACTION AND CHALLENGES.. Buy it here: St. Kliment Ohridski University Press -University Press (2025)…

  • Antibiotics

    Antisense and Functional Nucleic Acids in Rational Drug Development..

  • Methods in Molecular Biology: RNA Amplification and Analysis

    Computational Design of Allosteric Ribozymes via Genetic Algorithms..

  • Antibiotics

    General and Specific Cytotoxicity of Chimeric Antisense Oligonucleotides in Bacterial Cells and Human Cell Lines..

  • Antibiotics

    Targeting FMN, TPP, SAM-I, and glmS Riboswitches with Chimeric Antisense Oligonucleotides for Completely Rational Antibacterial Drug Development..

  • Journal of Biotechnology

    GHOST-NOT and GHOST-YES: Two Programs for Generating high-speed Biosensors with Randomized Oligonucleotide Binding Sites with NOT or YES Boolean Logic Functions Based on Experimentally Validated Algorithms..

  • Antibiotics

    Targeting SAM-I Riboswitch Using Antisense Oligonucleotide Technology for Inhibiting the Growth of Staphylococcus aureus and Listeria monocytogenes..

  • ACS Applied Bio Materials

    Targeting TPP Riboswitches Using Chimeric Antisense Oligonucleotide Technology for Antibacterial Drug Development..

  • ACS Synthetic Biology

    Engineering antisense oligonucleotides as antibacterial agents that target FMN riboswitches and inhibit the growth of Staphylococcus aureus, Listeria monocytogenes, and Escherichia coli..

  • Computers in Biology and Medicine

    An allosteric ribozyme generator and an inverse folding ribozyme generator: Two computer programs for automated computational design of oligonucleotide-sensing allosteric hammerhead ribozymes with YES Boolean logic function based on experimentally validated algorithms..

  • ACS Synthetic Biology

    Targeting glmS Ribozyme with Chimeric Antisense Oligonucleotides for Antibacterial Drug Development..

  • Future Medicinal Chemistry

    Versatile tools of synthetic biology applied to drug discovery and production..

  • New Frontiers and Applications of Synthetic Biology

    Book chapter 8: Small RNA-based systems for sensing and therapeutic applications..

  • Environmental Chemistry Letters

    Environmental factors influencing the transmission of the coronavirus 2019..

  • Environmental Chemistry Letters

    Lignocellulose, algal biomass, biofuels and biohydrogen: a review..

  • Plant Gene

    Molecular factors affecting tomato fruit size..

  • Environmental Chemistry Letters

    Phycoremediation of wastewater by microalgae: a review..

  • Proceedings of the Bulgarian Academy of Sciences

    Engineering a Plasmid as a Reporter System for Quantifying Gene Expression in Escherichia Coli..

  • Biomedical Engineering: Concepts, Methodologies, Tools, and Applications

    Nucleic Acids-Based Nanotechnology: Engineering Principals and Applications…

  • Environmental Chemistry Letters

    Methods for prevention and constraint of antimicrobial resistance: a review..

  • IEEE Transactions on Computational Biology and Bioinformatics

    RSwitch: a novel bioinformatics database on ribo- switches as anti- bacterial drug targets..

  • Environmental Chemistry Letters

    New drug discovery strategies for targeting drug..

  • Gene

    Riboswitch distri- bution, structure, and function in bacteria…

  • Research Anthology on Recent Advancements in Ethnopharmacology and Nutraceuticals

    Plant-Derived Compounds and Their Potential Role in Drug Development…

  • Biosensors and Bioelectronics

    Automated DNA hybridization transfer with movable super-paramagnetic microbeads in a microflow reactor…

  • Drug Discovery Targeting Drug Resistant Bacteria

    Mechanisms of antibacterial drug resistance and approaches to overcome…

  • Biomedical Journal of Scientific and Techno- logical Research

    Current Activators of the glmS Riboswitch…

  • Antibiotics

    Bioinformatics and Genomic Analyses of the Suitability of Eight Riboswitches for Antibacterial Drug Targets…

  • EC Microbiology

    Why Some Ribo- switches are Suitable Targets for Anti- bacterial Drug Discovery?…

  • Sustainable Agriculture Reviews 46, Mitigation of Antimicrobial Resistance Vol. 1, Tools and Targets:

    Chapter 9: "Drug Discovery for Targeting Drug Resistant Bacteria…

  • EC Microbiology

    Why Some Functional RNAs Such as Bacterial Riboswitches are Versatile Targets for Antibacterial Drug Discovery?…

  • Sustainable Agriculture Reviews 49 Mitigation of Antimicrobial Resistance Vol. 2

    Chapter 1: Strategies for prevention and containment of antimicrobial resistance…

  • Acta Microbiologica Bulgarica

    Various therapies against SARS-CoV-2…

  • Archieves of Clinical Microbiology

    Engineering antisense oligonucleotides as antibacterial agents…

  • International Journal of Bioinformatics Research and Applications

    ExBWS: Extended Bioinformatics Web Services for Sequence Analyses…

  • International Journal of Biomedical and Clinical Engineering

    Clinical Trials of Functional Nucleic Acids: Antisense Oligonucleotides and Aptamers…

  • IEEE Transactions on Computational Biology and Bioinformatics

    EBWS: Essential Bioinformatics Web Services for Sequence Analyses…

  • Acta Microbiologica Bulgarica

    Coronavirus SARS-CoV-2: Where do we stand?…

  • Book ISBN:978-619-91360-1

    An integrated DNA selection in micro-flow reactors as an approach for molecular computa- tion and diagnostics…

  • International Journal of Biomedical and Clinical Engineering

    Plant-Derived Compounds and Their Potential Role in Drug Development…

  • Biomedical Journal of Scientific and Technol- ogical Research

    RNA as a Potent Target for Antibacterial Drug Discovery…

  • International Journal of Biomedical and Clinical Engineering

    Arabidopsis Homologues to the LRAT a Possible Substrate for New Plant-Based Anti-Cancer Drug Development…

  • Emerging Research on Bioinspired Materials Engineering

    Synthetic Approaches to Biology: Engineering Gene Control Circuits, Synthesizing and Editing Genomes…

  • Expert Opinion on Drug Discovery

    Designing drugs that overcome antibacterial resistance: where do we stand and what should we do?…

  • Biotechnology Advances

    Computational design of allosteric ribozymes as molecular biosensors…

  • Handbook of Research on Nanoscience, Nanotechnology, and Advanced Materials

    Nucleic Acids-Based Nanotechnology: Engineering Principals and Applications…

  • Nucleic Acid Therapeutics

    Computational Selection and Experimental Validation of Allosteric Ribozymes That Sense a Specific Sequence of Human Telomerase Reverse Transcriptase mRNAs as Universal Anticancer Therapy Agents…

    Supplementary data…

  • Lab on a Chip

    Programmable and automated bead-based microfluidics for versatile DNA microarrays under isothermal conditions…

    Supplementary data…

  • Biomacromolecules

    Computational Design and Biosensor Applications of Small Molecule-Sensing Allosteric Ribozymes…

    Supplementary data…

  • Journal of Clinical & Medical Genomics

    Present and Future RNA-based Approaches to Medical Genomics…

  • Bioinformatics: Concepts, Methodologies, Tools, and Applications

    Engineering gene control circuits with allosteric ribozymes in human cells as a medicine of the future…

  • Expert Opinion on Drug Discovery

    Riboswitch-based antibacterial drug discovery using high-throughput screening methods…

  • ACS Synthetic Biology

    Engineering integrated digital circuits with allosteric ribozymes for scaling up molecular computation and diagnostics…

    Supplementary data…

  • Quality Assurance in Healthcare Service Delivery, Nursing and Personalized Medicine

    Engineering gene control circuits with allosteric ribozymes in human cells as a medicine of the future…

  • Nature Biotechnology

    Computational design and experimental validation of oligonucleotide-sensing allosteric ribozymes…

    Supplementary data… has recommended by Faculty of 1000 Biology…

  • Journal of Computational Biology

    DNA library design for molecular computation…

  • Nucleic Acids Research

    End-specific covalent photo-dependent immobilisation of synthetic DNA to paramagnetic beads…

  • RNA Biology

    Development and application of a high- throughput assay for glmS riboswitch activators…

  • Lecture Notes in Computer Science

    Cascadable hybridisation transfer of specific DNA between microreactor selection modules…

  • Lecture Notes in Computer Science

    Steady flow micro-reactor module for pipelined DNA computations…

  • Comptes redus de I'Academie bulgare des Sciences

    The tumor suppressor mutation l(2)gd in D. melanogaster elevates the binding activity of the transcription factors AP-1…

  • DOCTORAL THESIS of Cologne Univesity

    An integrated DNA selection in micro-flow reactors as an approach for molecular computa- tion and diagnostics…

  • NEWS PAPERS


    Der GMD-Spiegel

    Programmieren mit Molekuelen…

  • GMD-News

    Configurable DNA computing…